IMOD

IMOD - Set of image processing, modeling and display programs used for tomographic reconstruction
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IMOD Ranking & Summary

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  • Rating:
  • License:
  • Freeware
  • Price:
  • FREE
  • Publisher Name:
  • Boulder Laboratory for 3-D Electron Microscopy of Cells
  • Publisher web site:
  • http://bio3d.colorado.edu/imod/
  • Operating Systems:
  • macOS
  • File Size:
  • 12.7 MB
  • Release Date:
  • 2021-06-02 04:36:56

IMOD Tags


IMOD Description

IMOD - Set of image processing, modeling and display programs used for tomographic reconstruction IMOD is a set of image processing, modeling and display programs used for tomographic reconstruction and for 3D reconstruction of EM serial sections and optical sections.The package contains tools for assembling and aligning data within multiple types and sizes of image stacks, viewing 3-D data from any orientation, and modeling and display of the image files. IMOD was designed primarily by David Mastronarde, Sue Held, Rick Gaudette and Jim Kremer and was tested at the Boulder Laboratory for 3-D Electron Microscopy of Cells.Requirements:· IMOD requires OpenGL libraries.· Hardware accelerated 24-bit graphics is recommended for viewing models. What's New in This Release: · 3/21/08: Fixed running of Finishjoin from eTomo. · 3/20/08: Modified Windows .cmd wrappers so scripts can be run by their full path (but still doesn't work from eTomo). · 3/4/08: In Ccderaser, fixed bug when patch had more than 1000 pixels, fixed merging of multiple circles, and increased linear maximum extent of patches to 200. · 3/3/08: Fixed linklibs-mac to include libimesh not libmesh, and to add Intel libraries for Intel Mac. · 3/3/08: Fixed ability to run graphical Fortran programs on Mac (broken 3.10.22) and provided individual script to run each so it would run from command file. · 3/3/08: In Blendmont, fixed bad scaling of mode 1 data, fixed double-scaling of one line with binned output, and restored old behavior of floating to positive range for mode 1. · 2/28/08: Increased size of arrays in Corrsearch3d. · 2/21/08: Fixed ability to run anisotropic diffusion from etomo in Windows: changes in Chucksetup, Processchunks, eTomo. · 2/18/08: Stopped Processchunks from misinterpreting 'cd:' in a complaint about a key from ssh as a failure to cd. · 2/18/08: Stopped eTomo from taking up increasing memory and CPU time up to 100% if the parallel processing screen is left open for hours. · 2/18/08: Kept processchunks from using lots of CPU time when there are many "machines" and many chunks. · 2/6/08: Prevented 3dmod started from eTomo from crashing by writing messages (e.g., from modv snapshots) to terminal after eTomo has exited. · 2/4/08: Fixed findhotpixels if filenames entered with -input & -output. · 1/31/08: Increased allowed filename length from 120 to 320 in header; filenames too long were screwing up tomograms.


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