PercolatorA proteomics post processor to help you with your work. | |
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- License:
- Apache License 2.0
- Publisher Name:
- Lukas K?ll
- Operating Systems:
- Windows NT / 2K / XP / Vista
- File Size:
- 598 KB
Percolator Tags
- spectra Post Production Processor POST data processor mass spectrometry assay harvested spectra proteomics post processor spectrometry assay proteomics analysis proteomics quantitative proteomics proteomics data analysis proteomics data proteomics data manager manage proteomics data spectrometry based proteomics proteomics data simulation simulate proteomics data calculate statistics proteomics data analyzer
Percolator Description
Percolator is a simple and easy-to-use tool that will provide users with a proteomics post processor. The first step in analyzing an mass spectrometry assay is to match the harvested spectra against a target database using database search engines such as Sequest and Mascot, a process that renders list of peptide-spectrum matches. However, it is not trivial to assess the accuracy of these identifications. Percolator uses a semi-supervised machine learning to discriminate correct from incorrect peptide-spectrum matches, and calculates accurate statistics such as q-value (FDR) and posterior error probabilities.
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