inGAP Genome analysis made easy.
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inGAP Ranking & Summary

inGAP Tags

analysis Analyze view Genome Browser Annotate Genome Visualize Genome Genome search genome sequence genome sequence searcher find genome sequence analyze genome genome analysis genome analyzer view multiple genome multiple genome viewer search genome genome analysis suite virus genome comparison compare virus genome genome sequence viewer display genome sequence view genome data genome data viewer browse genome view genome close related genome genome language prokaryotic genome Arabidopsis genome analysis view Arabidopsis genome analyze Arabidopsis genome analyze bacterial genome Genome visualization Genome Viewer UCSC genome bioinformatics genome-wide association genome circular visualization compare genome sequence genome sequence UCSC genome browser track manage genome track genome track manager analyze human Genome Genome Calculator view genome file genome mapping genome map visualization genome hybridisation array display genome data human genome analysis human genome Genome Scanner bacterial genome sequence Genome Explorer Quantitative Genome microbial genome genome comparison nucleotide polymorphisms characterize genome genome characterization Genome Positioning System genome rate view bacterial genome bacterial genome visualization

inGAP Description

inGAP is a handy, easy to use application specially designed to offer you an integrative next-generation genome analysis pipeline, which employed a Bayesian principle to detect single nucleotide polymorphisms (SNPs), small insertion/deletions (indels). inGAP has been applied to a number of genome projects, including bacteria, yeast, plants and mammals. You can use this tool in order to: refine short read alignment by re-aligning short reads around a putative SV, detect large-size structural variations using paired end sequencing reads or visualize SAM-formatted alignments and SVs.

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