v3d A Swiss army knife for bioimage visualization & analysis
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v3d Description

v3d is a handy and reliable application designed to enable you to explore and understand your 3D/4D/5D images a lot easier. It also provides many unique functions, supports a very simple and powerful plugin interface and thus can be extended & enhanced easily. It's a tool for visualizing large-scale (gigabytes, and 64-bit data) 3D image stacks and various surface data. It is also a container of powerful modules for 3D image analysis (cell segmentation, neuron tracing, brain registration, annotation, quantitative measurement and statistics, etc) and data management. This makes V3D suitable for various bioimage informatics applications, and a nice platform to develop new 3D image analysis algorithms for high-throughput processing. In short, V3D streamlines the workflow of visualization-assisted analysis. V3D can render 5D (spatial-temporal) data directly in 3D volume-rendering mode; it supports convenient and interactive local and global 3D views at different scales. It even has a Matlab file IO toolbox. Probably most importantly, you can now write your own plugins to take advantage of the V3D platform!

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